Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs356806 | chr18:26382892 | A/G | 0.000352 | 214 | 16.93 | 11.77 | 14.83 | KM Plot |
| KIRP | rs35706352 | chr6:27793992 | G/A | 1.98E-7 | 214 | 16.5 | 12 | 9.77 | KM Plot |
| KIRP | rs35715914 | chr6:27592003 | C/T | 1.98E-7 | 212 | 16.45 | 16.43 | 9.77 | KM Plot |
| KIRP | rs35722727 | chr10:102012645 | TTTAA/T | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs35744819 | chr6:28318331 | G/T | 2.33E-7 | 212 | 16.47 | 12.8 | 9.77 | KM Plot |
| KIRP | rs35749575 | chr6:28114818 | G/T | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs35760680 | chr11:8522072 | A/G | 0.000466 | 214 | 16.43 | 17.2 | 4.82 | KM Plot |
| KIRP | rs35776439 | chr16:20446856 | A/G | 0.000407 | 211 | 16.43 | 13.6 | 1.73 | KM Plot |
| KIRP | rs35781323 | chr6:28144832 | T/C | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs35806480 | chr5:176634152 | G/A | 4.92E-7 | 212 | 15.33 | 20.53 | 4.93 | KM Plot |
| KIRP | rs35807094 | chr11:8550345 | T/C | 0.000403 | 214 | 16.43 | 17.2 | 4.82 | KM Plot |
| KIRP | rs35808653 | chr1:63810941 | A/C | 3.91E-6 | 207 | 15.33 | 17.2 | 8.03 | KM Plot |
| KIRP | rs35815698 | chr6:26372460 | C/CT | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs35819751 | chr6:27810569 | A/G | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
| KIRP | rs35845351 | chr5:79955845 | AT/A | 0.000112 | 210 | 18.65 | 15.07 | 9.77 | KM Plot |